The function allows the import of an existing dynamic vars
profile in json format. This is a quick and convenient way to set up
the workflow, alternative to specifying lookup tables manually through
the corresponding setter functions. For more details,
refer to the dedicated vignette
vignette("workflow_start", package="ISAnalytics").
See also
Other Utilities:
as_sparse_matrix(),
comparison_matrix(),
enable_progress_bars(),
export_ISA_settings(),
generate_Vispa2_launch_AF(),
generate_blank_association_file(),
generate_default_folder_structure(),
separate_quant_matrices(),
transform_columns()
Examples
tmp_folder <- tempdir()
export_ISA_settings(tmp_folder, "DEFAULT")
#> Settings profile correctly saved
#> ℹ Saved at: /tmp/RtmpeXTxGZ/DEFAULT_ISAsettings.json
import_ISA_settings(fs::path(tmp_folder, "DEFAULT_ISAsettings.json"))
#> Mandatory IS vars successfully changed
#> Annotation IS vars successfully changed
#> Association file columns specs successfully changed
#> ISS stats specs successfully changed
#> Matrix suffixes specs successfully changed
reset_dyn_vars_config()
#> Mandatory IS vars reset to default
#> Annotation IS vars reset to default
#> Association file columns specs reset to default
#> ISS stats specs reset to default
#> Matrix suffixes specs reset to default